Recommended Imaging Tools

A selection of tools for Image Viewing, Processing, and Analysis.

Insight Segmentation and Registration Toolkit (ITK)
ITK is an open-source, cross-platform system that provides developers with an extensive suite of software tools for image analysis.


TomoPy
TomoPy is an open-source Python package for tomographic data processing and image reconstruction.


ASTRA (All Scales Tomographic Reconstruction Antwerp) Toolbox
The ASTRA Toolbox is a MATLAB and Python toolbox of high-performance GPU primitives for 2D and 3D tomography. It is fast and open source.


NiftyRec
NiftyRec is software for tomographic reconstruction, providing fast GPU-accelerated reconstruction tools for emission and transmission computed tomography. It is open source and is MATLAB and Python scriptable.


Tomviz
Open source 3D tomography, visualization, and volumetric data processing with Python tools.


MATLAB Image Processing Toolbox
Provides a comprehensive set of reference-standard algorithms and workflow apps for image processing, analysis, visualization, and algorithm development.


elastix
Open source toolbox for rigid and nonrigid registration of images.


Orthanc
A free and open-source, lightweight DICOM server for medical imaging.


Pydicom
Allows you to read, modify, and write DICOM files, and implement the DICOM networking protocol in Python.


Horos
Horos is a free, open source medical image viewer.


3D Slicer
3D Slicer is an open source software platform for medical image informatics, image processing, and three-dimensional visualization.


MicroView
MicroView is a general-purpose 2D and 3D image viewer. It includes many built-in tools for basic image analysis, and an open plugin architecture, which permits the application to be extended and customized by third parties.